Honey Whole Wheat Protein Bagels

Featured in: Sweet Light Treats

These soft, chewy whole wheat bagels combine the wholesome goodness of whole grains with protein powder and a touch of honey for natural sweetness. After boiling with honey-infused water to form a perfect crust, the bagels bake to golden perfection. Served with a light, fluffy yogurt dip flavored with honey, lemon, and vanilla, this nourishing option suits breakfast or snack times. Simple kneading and rising techniques ensure a satisfying texture while offering room for variations with seeds or plant-based protein alternatives.

Updated on Mon, 23 Feb 2026 17:08:52 GMT
Honey whole wheat protein bagels with fluffy yogurt dip, golden and chewy, served with a light, creamy honey-lemon yogurt spread. Pin it
Honey whole wheat protein bagels with fluffy yogurt dip, golden and chewy, served with a light, creamy honey-lemon yogurt spread. | freshymeals.com

There's something deeply satisfying about biting into a freshly baked bagel—golden, chewy, with just the right amount of heft. Now imagine that same experience elevated with the wholesome richness of whole wheat flour, a boost of protein, and a kiss of honey sweetness. These Honey Whole Wheat Protein Bagels deliver all the comfort of a classic New York bagel while nourishing your body with ingredients that fuel your day. Paired with a light, fluffy yogurt dip that's lightly sweetened and brightened with lemon, this recipe transforms breakfast or snack time into a moment worth savoring.

Honey whole wheat protein bagels with fluffy yogurt dip, golden and chewy, served with a light, creamy honey-lemon yogurt spread. Pin it
Honey whole wheat protein bagels with fluffy yogurt dip, golden and chewy, served with a light, creamy honey-lemon yogurt spread. | freshymeals.com

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The magic of a great bagel lies in the balance between exterior and interior—a glossy, lightly crisp crust giving way to a soft, chewy center. By incorporating protein powder into the dough, these bagels offer sustained energy without sacrificing the texture you crave. The whole wheat flour adds a nutty depth, while honey provides a subtle sweetness that caramelizes beautifully during baking. Whether you're looking for a post-workout refuel or a wholesome snack to share with family, these bagels deliver satisfaction in every bite.

Ingredients

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  • 2 cups (240 g) whole wheat flour
  • 1 cup (120 g) bread flour
  • 1 scoop (30 g) unflavored whey protein powder
  • 2 ¼ tsp (7 g) instant yeast
  • 1 ¼ cups (300 ml) warm water (110°F/43°C)
  • 2 tbsp (30 g) honey (for dough)
  • 1 tsp (6 g) fine sea salt
  • 1 tbsp (15 g) honey (for boiling)
  • 2 quarts (2 L) water (for boiling)
  • 1 cup (240 g) Greek yogurt (plain, 2% or full fat)
  • 2 tbsp (30 ml) honey (for dip)
  • 1 tsp (5 ml) lemon juice
  • ½ tsp (2 ml) vanilla extract
  • Pinch of sea salt (for dip)

Instructions

Step 1: Combine dry ingredients
In a large mixing bowl, combine whole wheat flour, bread flour, protein powder, and salt.
Step 2: Activate yeast
In a separate bowl, stir honey into warm water until dissolved. Sprinkle yeast over the water and let sit for 5 minutes until slightly foamy.
Step 3: Knead the dough
Add the yeast mixture to the dry ingredients. Mix until a shaggy dough forms, then knead by hand or with a dough hook for 8–10 minutes, until smooth and elastic.
Step 4: First rise
Place dough in a lightly oiled bowl, cover, and let rise in a warm place for 1 hour, or until doubled in size.
Step 5: Shape bagels
Punch down the dough and divide into 8 equal pieces. Shape each into a ball, then poke a hole in the center and gently stretch into a bagel shape.
Step 6: Rest shaped bagels
Place shaped bagels on a parchment-lined tray, cover lightly, and let rest for 10 minutes.
Step 7: Preheat oven
Preheat oven to 425°F (220°C).
Step 8: Boil bagels
Bring 2 quarts of water to a gentle boil in a large pot. Stir in 1 tbsp honey. Boil bagels in batches, 1 minute per side. Remove with a slotted spoon and return to the tray.
Step 9: Bake
Bake bagels for 18–22 minutes, until golden brown. Cool on a wire rack.
Step 10: Prepare yogurt dip
For the dip, whisk Greek yogurt, honey, lemon juice, vanilla, and salt in a bowl until light and fluffy.
Step 11: Serve
Serve cooled bagels with the fluffy yogurt dip.

Zusatztipps für die Zubereitung

For the best texture, make sure your water temperature is accurate when activating the yeast—too hot will kill it, too cold won't activate it properly. When kneading, the dough should be slightly tacky but not sticky; add a tablespoon of flour at a time if needed. The boiling step is essential for creating that signature chewy bagel crust—don't skip it. If you want a shinier finish, brush the boiled bagels lightly with an egg wash before baking. For even browning, rotate the baking tray halfway through baking time.

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Varianten und Anpassungen

Swap whey protein for plant-based protein powder if desired for a vegan-friendly option (and use plant-based yogurt for the dip). Add seeds such as sesame, poppy, or sunflower on top before baking for extra crunch and visual appeal. The yogurt dip can be flavored with cinnamon or orange zest for variation—try a pinch of cardamom for a warm, aromatic twist. For a savory version, omit honey from the dough and dip, and add garlic powder and herbs instead. You can also experiment with different flours like spelt or rye for a heartier flavor profile.

Serviervorschläge

These bagels are incredibly versatile and can be enjoyed in countless ways. Slice and toast them, then spread with the fluffy yogurt dip for a simple, satisfying breakfast. Top with fresh berries, sliced banana, or a drizzle of extra honey for a sweet treat. For a more substantial meal, layer with smoked salmon, cucumber, and red onion, or create a hearty breakfast sandwich with scrambled eggs and avocado. The yogurt dip also works beautifully as a fruit dip or a topping for granola and overnight oats. Store bagels in an airtight container at room temperature for up to 3 days, or freeze for up to 3 months.

Honey whole wheat protein bagels with fluffy yogurt dip, golden and chewy, served with a light, creamy honey-lemon yogurt spread. Pin it
Honey whole wheat protein bagels with fluffy yogurt dip, golden and chewy, served with a light, creamy honey-lemon yogurt spread. | freshymeals.com

These Honey Whole Wheat Protein Bagels prove that wholesome eating doesn't mean sacrificing flavor or satisfaction. With their golden, chewy exterior and tender crumb, they rival any bakery bagel—while delivering the added benefits of whole grains and protein. The fluffy yogurt dip is the perfect companion, offering creamy sweetness and bright lemon notes that complement the honey-kissed bagels beautifully. Whether you're fueling up for a busy day or enjoying a leisurely weekend brunch, this recipe brings nourishment and joy to your table.

Recipe FAQs

What makes these bagels soft and chewy?

The combination of whole wheat and bread flours, along with proper kneading and boiling in honey water, creates a soft yet chewy texture.

Can I substitute the whey protein powder?

Yes, plant-based protein powders can be used as an alternative without sacrificing texture or flavor.

How does boiling with honey water affect the bagels?

Boiling in honey-infused water helps develop a slightly sweet, glossy crust while setting the bagel's shape and texture.

What variations can enhance the yogurt dip?

Adding cinnamon or orange zest can bring additional warmth and brightness to the creamy dip.

How should the dough be handled after mixing?

After mixing, the dough should be kneaded until smooth and elastic, then left to rise until doubled in size for best results.

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Honey Whole Wheat Protein Bagels

Soft whole wheat bagels enriched with protein and honey, served alongside a creamy yogurt dip.

How long to prep
25 min
Time to cook
22 min
Overall time
47 min
Recipe by Freshymeals Lily Carter

Dish category Sweet Light Treats

Skill level Medium

Cuisine type American

Makes 8 Serving size

Dietary details Vegetarian option

What you need

Bagel Dough

01 2 cups whole wheat flour
02 1 cup bread flour
03 1 scoop unflavored whey protein powder
04 2¼ teaspoons instant yeast
05 1¼ cups warm water at 110°F
06 2 tablespoons honey
07 1 teaspoon fine sea salt

Boiling Water

01 2 quarts water
02 1 tablespoon honey

Yogurt Dip

01 1 cup Greek yogurt, plain 2% or full fat
02 2 tablespoons honey
03 1 teaspoon lemon juice
04 ½ teaspoon vanilla extract
05 Pinch of sea salt

Steps to follow

Step 01

Combine Dry Ingredients: In a large mixing bowl, combine whole wheat flour, bread flour, protein powder, and salt.

Step 02

Activate Yeast: In a separate bowl, stir honey into warm water until dissolved. Sprinkle yeast over the water and let sit for 5 minutes until slightly foamy.

Step 03

Mix and Knead Dough: Add the yeast mixture to the dry ingredients. Mix until a shaggy dough forms, then knead by hand or with a dough hook for 8 to 10 minutes, until smooth and elastic.

Step 04

First Rise: Place dough in a lightly oiled bowl, cover, and let rise in a warm place for 1 hour, or until doubled in size.

Step 05

Shape Bagels: Punch down the dough and divide into 8 equal pieces. Shape each into a ball, then poke a hole in the center and gently stretch into a bagel shape.

Step 06

Second Rise: Place shaped bagels on a parchment-lined tray, cover lightly, and let rest for 10 minutes.

Step 07

Preheat Oven: Preheat oven to 425°F.

Step 08

Prepare Boiling Water: Bring 2 quarts of water to a gentle boil in a large pot. Stir in 1 tablespoon honey.

Step 09

Boil Bagels: Boil bagels in batches, 1 minute per side. Remove with a slotted spoon and return to the tray.

Step 10

Bake Bagels: Bake bagels for 18 to 22 minutes, until golden brown. Cool on a wire rack.

Step 11

Prepare Yogurt Dip: Whisk Greek yogurt, honey, lemon juice, vanilla extract, and salt in a bowl until light and fluffy.

Step 12

Serve: Serve cooled bagels with the fluffy yogurt dip.

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Tools you’ll need

  • Large mixing bowl
  • Dough hook or hands for kneading
  • Parchment-lined baking tray
  • Large pot for boiling
  • Slotted spoon
  • Wire cooling rack
  • Whisk and small mixing bowl

Allergy info

Always check each ingredient for allergens and talk to a professional if unsure.
  • Contains wheat and gluten
  • Contains dairy from yogurt and whey protein
  • May contain eggs or tree nuts if using flavored protein powder—verify product labels

Nutrition info (per portion)

Nutrition details are for reference only, not a substitute for health advice.
  • Calories per serving: 240
  • Fat content: 2.5 g
  • Carbohydrates: 42 g
  • Protein amount: 13 g

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